Perozo Lab

The Perozo lab focuses on understanding how different forms of energy (like electric fields and mechanical forces) are converted into protein motion, particularly in mechanotransduction within the inner ear. Their specific areas of study include cochlear amplification through prestin-driven outer hair cell electromotility and the mechanoelectrical transduction complex (METC), which involves tip-link-driven mechanotransduction. These investigations aim to uncover the fundamental principles governing voltage-dependent conformational changes and mechanotransduction. Their approach integrates advanced techniques like cryo-EM and computational methods to elucidate the structural and dynamic aspects of these mechanosensitive complexes, aiming to establish molecular principles linking membrane protein function with their structure.

Eduardo Perozo

Eduardo Perozo

Margaret Milewski

Margaret Milewski

Patrick Haller

Patrick Haller

Zeeshan Banday

Zeeshan Banday

Camila Makhlouta

Camila Makhlouta

Mukesh Kumar

Mukesh Kumar

Richa Agrawal

Richa Agrawal

Zhen Tong

Zhen Tong

Jane Demchenko

Jane Demchenko

Naileth González

Naileth González

Yaikhomba Mutum

Yaikhomba Mutum

Gustavo Contreras

Gustavo Contreras

Madi Guski

Madi Guski

Zachary Fournier

Zachary Fournier

Adam Feher

Adam Feher

Noelle Robert

Noelle Robert

Prestin and the mechanism of outer hair cell electromotility 

Prestin’s voltage-dependent conformational changes are driven by the putative displacement of residue R399 and a set of sparse charged residues within the transmembrane domain, following the binding of a Clanion at a conserved binding site formed by the amino termini of the TM3 and TM10 helices. However, a major conundrum arises as to how an anion that binds in proximity to a positive charge (R399), can promote the voltage sensitivity of prestin. Using hydrogen–deuterium exchange mass spectrometry, we found that prestin displays an unstable anion-binding site, where folding of the amino termini of TM3 and TM10 is coupled to Cl binding. This event shortens the TM3–TM10 electrostatic gap, thereby connecting the two helices, resulting in reduced cross-sectional area. These folding events upon anion binding are absent in SLC26A9, a non-electromotile transporter closely related to prestin. Dynamics of prestin embedded in a lipid bilayer closely match that in detergent micelle, except for a destabilized lipid-facing helix TM6 that is critical to prestin’s mechanical expansion. We observed helix fraying at prestin’s anion-binding site but cooperative unfolding of multiple lipid-facing helices, features that may promote prestin’s fast electromechanical rearrangements. These results highlighted a novel role of the folding equilibrium of the anion-binding site, and is helpful in defining prestin’s unique voltage-sensing mechanism and electromotility.

Recent

BK channel voltage-gating mechanism probed by single-particle cryo-EM(2024)

In the Ca2+ and voltage-activated BK channel, allosteric communication between the pore, voltage sensors, and Ca2+ binding underlies its role as physiological chemo-electrical signal integrator in a variety of functions, from maintaining smooth muscle tone to hearing and neurosecretion. Unlike voltage-dependent K+ channels, where the mechanism of voltage sensing has been studied in detail, little is known about the unique properties of the BK voltage sensor domain (VSD) that lead to its rather shallow voltage dependence. Here we explore the mechanistic basis of the coupling between the voltage and calcium sensors by evaluating the structural consequences of locking the voltage sensor in either the resting or active states. By solving the Cryo-EM structure of the S4 transmembrane segment three arginine-neutralizing mutants (R196Q, R199Q, R202Q), in aplysia BK (with or without calcium), we evaluate the nature of the conformational changes that couple the VSD and the Ca2+ binding sites. VSD-activated structures (R196Q and R199Q) show a reciprocal relation between calcium and voltage sensors, and the VSD resting structure (R202Q) reveals a deeper closed state, reflected by a narrow pore profile compared to previous BK channel closed structures. This new set of structures not only provides plausible conformations to map the degree of coupling between different sensors and the pore, but ultimately settle earlier debate regarding the nature of activation-deactivation gating.

Structural implications of lipid protein interactions in prestin-mediated electromotility (2024)

Mammals have evolved a highly sophisticated sense of hearing that is characterized by an extraordinary ability to process high-frequency sounds, such as echolocation. This represents the pinnacle of mechanosensory evolution made possible by a mechanism of sound amplification, which involves the specialized “electromotility” of the mammalian outer hair cells. The voltage-dependent motor protein prestin (also known as SLC26A5) is responsible for the electromotive behaviour of outer hair cells and underlies the cochlear amplifier. Disruption or loss of prestin function can lead to disabling hearing loss. Recent 3D structures of prestin have begun to unravel the mechanism through which it converts voltage changes into membrane areal expansion. However, the specific structural elements conferring voltage and mechanosensitivity to prestin remain elusive. To address this, we introduced mutations in dolphin and human prestin that shift its midpoint of activation across various membrane potentials (in increments of +100 mV). We solved the high-resolution structures of these mutants using single particle cryo-electron microscopy (EM) in detergents and various lipid compositions. Our investigation revealed the significance of conserved glycine residues located on one of the peripheral transmembrane helices, TM6. These glycine residues serve as hinges at the interface between the protein and the lipid bilayer, influencing prestin’s voltage sensitivity and, consequently, its mechanotransduction. Patch-clamp electrophysiology and molecular dynamics simulations further corroborate these structural data. Together, these findings provide valuable insights into the modulation of lipids and the functional mechanisms of this motor protein in the mammalian cochlea.

Folding of prestin’s anion-binding site and the mechanism of outer hair cell electromotility

Prestin responds to transmembrane voltage fluctuations by changing its cross-sectional area, a process underlying the electromotility of outer hair cells and cochlear amplification. Prestin belongs to the SLC26 family of anion transporters yet is the only member capable of displaying electromotility. Prestin’s voltage-dependent conformational changes are driven by the putative displacement of residue R399 and a set of sparse charged residues within the transmembrane domain, following the binding of a Cl anion at a conserved binding site formed by the amino termini of the TM3 and TM10 helices. However, a major conundrum arises as to how an anion that binds in proximity to a positive charge (R399), can promote the voltage sensitivity of prestin. Using hydrogen–deuterium exchange mass spectrometry, we find that prestin displays an unstable anion-binding site, where folding of the amino termini of TM3 and TM10 is coupled to Cl binding.

Prestin and the cochlear amplifier

 

Perozo Lab’s research revealed that prestin drives outer hair cell electromotility through voltage-sensitive conformational changes influenced by anion binding, uncovering the molecular mechanisms behind mammalian hearing amplification.

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